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ZENODO
Dataset . 2025
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
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12S rRNA V5-V6 (Fish-12S-MiFish-Miya) amplicon reference sequence database

Research datakeyboard_double_arrow_right Dataset 20 Nov 2025 English Publisher:Zenodo
Authors: Silliman, Katherine;

doi: 10.5281/zenodo.17664846 , 10.5281/zenodo.17664847

12S rRNA V5-V6 (Fish-12S-MiFish-Miya) amplicon reference sequence database

Abstract

12S rRNA MiFish amplicon reference sequence database in QIIME2 .qza format. Includes a previously published rCRUX-generated database leveraging NCBI nucleotide database (nt) sequences as of December. 2022 (Gold, Curd, et al., 2023), sequences from the MitoFish database (Zhu et al., 2023) missing from the rCRUX database, 148 recently generated sequences across 68 Gulf fish taxa (Janosik et al., in review), and 15 new reference fish sequences from the Gulf of Mexico/Gulf of America.

Related Organizations
Keywords

Gulf of Mexico, Fish, metabarcoding, 12S rRNA, MiFish, DNA, Environmental

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    		 Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    		 Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Related to Research communities
European Marine Science