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ZENODO
Dataset . 2025
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
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Spatial transcriptomics analysis code

Research datakeyboard_double_arrow_right Dataset 31 Dec 2025Publisher:Zenodo
Authors: Fang, Zhuoqing; Zhang, Haibo;

doi: 10.5281/zenodo.17651970 , 10.5281/zenodo.17651969

Spatial transcriptomics analysis code

Abstract

This repository contains the code used for the spatial transcriptomics analysis of mouse lung tissue samples included in the study. The analysis was performed on three experimental groups: (1) unvaccinated mice, (2) mice vaccinated with GLA-3M-052-LS + OVA, and (3) mice vaccinated with GLA-3M-052-LS + OVA with CD4/CD8 blocking. The code was used to process raw spatial transcriptomics data, perform quality control, generate spatial expression matrices, and conduct downstream analyses including clustering, differential expression, and spatial domain mapping.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
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Average