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License: CC BY
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Presentation . 2025
License: CC BY
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Ecolink: Towards a Knowledge Graph Schema for Complex Environmental Systems

Authors: Tim Alamenciak; Carlos Alberto Arnillas; Harry Caufield; Katherine Compton; Kian Drew; Robert Frühstückl; Tina Heger; +6 Authors

Ecolink: Towards a Knowledge Graph Schema for Complex Environmental Systems

Abstract

Research findings in ecology have the potential to drive evidence-based actions that could reverse biodiversity decline, inspire nature-based solutions to climate change and enhance restoration of severely degraded waters and lands. However, publishing findings in peer-reviewed papers alone is not sufficient to turn ecological research into action, as evidenced by the burgeoning field of translational ecology. Scholarly literature remains inaccessible to many conservation and restoration practitioners. While the open access publishing movement has increased the availability of research, the knowledge is still poorly indexed and unstructured,leading to inadequate findability. We present a solution to these challenges in the form of the Ecolink Model (ELM) – an open-source schema for creating knowledge graphs that describe environmental variables, ecological processes and the relationships between them. Drawing on core concepts from ecological modeling and advances in biomedical knowledge synthesis, we outline a model written in LinkML – a domain-agnostic data modeling language – that captures the relationships at the heart of complex systems, thereby providing a structure for knowledge graphs. ELM establishes a consistent and reusable format that enables the discovery of new connections and presents knowledge in an easily searchable, intuitive way. Knowledge graphs that are constructed using ELM have the potential to enable restoration and conservation practitioners to easily access relevant research findings, to unveil new insights using graph data science techniques and drive an AI interface to provide plain-language access to ecological knowledge as described in the graph.

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    1
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
Green
Related to Research communities
Italian National Biodiversity Future Center