Supporting data for: Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic
Supporting data for: Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic
Supporting data for "Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic". This archive consists of: v1 variant_calls_and_benchmarks.tar.gz deepsomatic-training-set deepsomatic-multicancer-model-benchmark orthogonal-technology-benchmark orthogonal-tools-benchmark somatic-variant-calling-outputs deepsomatic_v1.8.0 strelka2 clairs_ssrs clairs_v0.2.0 varnet v2 scripts_and_commands.tar.gz deepsomatic.wdl bwa_mem2.wdl minimap2_ubam.wdl minimap2_fastq.wdl pbmm2.wdl vcf_intersection.py vcf_to_bed_v4.py tumor_purity_titration.sh normal_purity_titration.sh split_bam_normal.sh split_bam_tumor.sh generate_high_confidence_regions.sh clairs.sh strelka2.sh deepvariant_hybrid.sh mutational_matrix_generation.sh mutational_signature_analysis.sh wambam.sh sompy.sh
- University of California, Santa Cruz United States
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