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cartloader SeqScope Starter Tutorial Results

Research datakeyboard_double_arrow_right Dataset 28 Jun 2025Publisher:Zenodo

Authors: Cheng, Weiqiu; Kang, Hyun Min; Lee, Jun Hee;

doi: 10.5281/zenodo.15802634 , 10.5281/zenodo.15759404 , 10.5281/zenodo.15759403

cartloader SeqScope Starter Tutorial Results

- Summary
- Metrics

Abstract

The repository is part of a cartloader public tutorial based on the SeqScope mouse hippocampus datase. It showcases how to use cartloader toolkit to analyze and convert spatial transcriptomics data into web-optimized, spatially indexed PMTiles for downstream analysis, interactive web visualization, and data sharing across platforms. This repository provides PMTiles files for SGE dataset and its spatial factors from FICTURE analysis. These PMTiles files were generated using run_cartload2 from the cartloader toolkit.

Impact byBIP!

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	0
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average

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