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ZENODO
Dataset . 2025
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
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The B. subtilis replicative polymerases bind the sliding clamp with different strengths to tune their activity in DNA replication

Authors: O'Neal, Luke G.; Drucker, Madeline N.; Lai, Ngoc Khanh; Clemente, Ashley F.; Campbell, Alyssa P.; Way, Lindsey E.; Hong, Sinwoo; +5 Authors

The B. subtilis replicative polymerases bind the sliding clamp with different strengths to tune their activity in DNA replication

Abstract

This repository contains four zipped folders with data and code related to the manuscript entitled "The B. subtilis replicative polymerases bind the sliding clamp with different strengths to tune DNA replication." The folders contain: Figure data: plotted data organized by manuscript figure number (as MATLAB workspaces, .mat files). Functions: MATLAB functions needed to 1) integrate MicrobeTracker cell segmentation analysis with u-track point source detection and tracking analysis and 2) perform subsequent processing of u-track analysis results (as MATLAB scripts, .m files) Scripts: MATLAB scripts needed to perform different types of data analysis (as MATLAB scripts, .m files). These scripts are organized by type of analysis (radial distribution function analysis, diffusion coefficient analysis, etc). Sequence data: clamp-binding motif (CBM) sequences from C-family polymerases in Firmicutes species, grouped into PolC, DnaE1, and DnaE3 subtypes (as CSV files). Sequences are taken from the "representative polymerases" dataset in Timinskas, et al. Nucleic Acids Res. 2014, 42, 1393.

Related Organizations
Keywords

DNA Replication, Super-Resolution Microscopy, DNA Polymerase, Sliding Clamp, Single Molecule Imaging

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citations
The total number of citations received by all articles of the researcher of interest.
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average