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ZENODO
Dataset . 2025
License: CC 0
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC 0
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC 0
Data sources: Datacite
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Segmentation Networks and Representative Meshes from UK Biobank

Authors: Ugurlu, Devran; Qian, Shuang; Fairweather, Elliot; Mauger, Charlene; Ruijsink, Bram; Dal Toso, Laura; Deng, Yu; +6 Authors

Segmentation Networks and Representative Meshes from UK Biobank

Abstract

We present a database of representative left and right ventricular meshes constructed from patient-specific models based on a large cohort of ~55k participants from UK Biobank. It comprises 1423 representative tetrahedral finite element meshes across sex (male, female), body mass index (range: 16 - 42 kg/m²) and age (range: 49 - 80 years). For each mesh, it also includes: a realistic biventricular myocardial fibre structure a morphological coordinate system which describes the positions within ventricles based on (1) the apical-basal (Z), (2) transmural (ρ) (from endocardium to epicardium), (3) rotational (Φ) (anterior, anteroseptal, inferior, inferolateral, anterolateral) and (4) chamber-wise (left ventricle and right ventricle) coordinates. We also present trained network weights and nnUNet plan and hyperparameter selection files for cine MR segmentation models trained separately for the following views: 2 chamber, 3 chamber, 4 chamber and short axis. These are supplied as a zip of relevant nnUNet files for each view: Dataset101_UKBB_LAX_2Ch.zip, Dataset102_UKBB_LAX_3Ch.zip, Dataset103_UKBB_LAX_4Ch.zip, Dataset100_UKBB_Petersen_SAX.zip.

Related Organizations
Keywords

heart meshes, segmentation, cine MR

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average