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Software . 2021
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Software . 2023
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Software . 2023
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Software . 2023
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Software . 2021
Data sources: Datacite
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Software . 2023
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Software . 2021
Data sources: Datacite
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Data sources: Datacite
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pyPESTO - Parameter EStimation TOolbox for python

Authors: Schälte, Yannik; Fröhlich, Fabian; Stapor, Paul; Vanhoefer, Jakob; Weindl, Daniel; Jost, Paul Jonas; Wang, Dantong; +10 Authors

pyPESTO - Parameter EStimation TOolbox for python

Abstract

General Documentation (#1140, #1146, #1152, #1149, #1192) Updated Jupyter Notebooks (#1141) Update code to avoid deprecations/warnings (#1158, #1184) Updated maintainers and codeownership (#1171, #1170) Improve tests and GHA (#1178, #1185, #1188, #1190, #1193, #1199, #1198, #1197, #1208) Profile: Fix problem overwrite of profiling (#1153) Add warning, trying to profile fixed parameter (#1155) ProfileOptions: add some basic integrity checking (#1163) Fix pypesto.profile.parameter_profile incorrectly assuming symmetric bounds (#1166) Improve pypesto/profile/profile_next_guess.py (#1167) Parameter profile: retry optimization in case of failure (#1168) Fix incorrect types in pypesto.result.profile.ProfilerResult (#1210) Problem: Add/forward startpoint_kwargs in PetabImporter.create_problem (#1135) Support valid AMICI noise distributions that are invalid in PEtab (#1157) Fix startpoint sampling for PEtab-derived problems with fixed parameters (#1169) Optimize Log traceback in case of exceptions during optimizations (#1156) Saccess optimizer improvements (#1177, #1187, #1194, #1195, #1201, #1202, #1204) ESS optimizer improvements (#1176, #1181, #1182) Fix check for allow_failed_starts (#1180) Handle message and exitflag in histories (#1203) Fix indexing error for 0-dimensional HDF5 datasets (#1206) Hierarchical: Fix HierarchicalAmiciCalculator.call not setting 'hess' in result (#1161) Visualization: Fix legend argument checking for waterfall/parameter/history plots (#1139) Fix waterfall start indices for multiple results (#1200)

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This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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