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ZENODO
Model . 2025
License: CC 0
Data sources: ZENODO
ZENODO
Model . 2025
License: CC 0
Data sources: Datacite
ZENODO
Model . 2025
License: CC 0
Data sources: Datacite
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Pretrained nnU-Net Models for 3D Segmentation of Vertebral Bodies and Spinous Processes

Authors: Walle, Matthias; Matheson, Bryn E.; Boyd, Steven K.;

Pretrained nnU-Net Models for 3D Segmentation of Vertebral Bodies and Spinous Processes

Abstract

This repository provides pretrained nnU-Net (v2) models for 3D semantic segmentation of vertebral bodies and spinous processes (posterior spinal elements) from binary spine masks (individual vertebra). The models were trained on the Verse20 dataset (cropped to individual vertebrae), which includes annotated cervical, thoracic, and lumbar vertebrae. Segmentations include two labels: 1 = Spinous process 2 = Vertebral body These models are useful for refining vertebral morphology, identifying posterior elements, and enabling downstream applications such as vertebral labeling and finite element modeling. Input: Binary masks of the spine (e.g., merged or coarse spine segmentations).Output: Multi-label segmentations identifying vertebral bodies and spinous processes.

Related Organizations
Keywords

Vertebra Segmentation, Vertebral body, Posterior spinal elements, nnU-Net, VerSe

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average