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ZENODO
Dataset . 2025
License: CC 0
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC 0
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC 0
Data sources: Datacite
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Easy genomic regions for short-read variant calling

Research datakeyboard_double_arrow_right Dataset 22 Feb 2025Publisher:Zenodo
Authors: Li, Heng;

doi: 10.5281/zenodo.16755940 , 10.5281/zenodo.15683328 , 10.5281/zenodo.14911560 , 10.5281/zenodo.14903542

Easy genomic regions for short-read variant calling

Abstract

Panmask easy regions: pm151a.easy: excluding 151-mers occurring ≥1.01n times in the pangenome, where n is the number of genomes. pm151b.easy: further excluding low-complexity regions (LCRs) longer than 18bp identified by longdust pm401a.easy: 401-mers. Not well evaluated. pm401b.easy: excluding LCRs longer than 30bp *.longdust.bed.gz: LCRs generated by longdust v1.0 (sligtly different from the latest v1.2) They exclude all assembly gaps and non-chromosomal contigs. See panmask for details.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average