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geNomad database

Name: geNomad database
Creator: Antonio Camargo

Research datakeyboard_double_arrow_right Dataset 15 Aug 2022Publisher:Zenodo

Authors: Antonio Camargo;

geNomad database

- Summary
- Related research
  (2)
- Metrics

Abstract

Marker database used by geNomad for virus and plasmid identification. genomad_db_v1.9.tar.gz: MMseqs2 profile database. Entries are decorated with taxonomy information from a custom taxdump based on ICTV's MSL39. genomad_hmm_v1.9.tar.gz: HMMER HMM models. genomad_metadata_v1.9.tsv.gz: Metadata for all the 227,918 markers. genomad_msa_v1.9.tar.gz: Multiple sequence alignments in FASTA format.

Related Organizations

Joint Genome Institute
United States

2 Research products, page 1 of 1

apcamargo/genomad: geNomad v1.9.0
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Impact byBIP!

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	2
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average