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Claim

optTMT: A Shiny application to optimize any experimental design to minimize the TMT reporter ion interference

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 21 Apr 2024Embargo end date: 17 Feb 2025Publisher:Zenodo
Authors: GERAULT, Marc-Antoine;

doi: 10.5281/zenodo.14883261 , 10.5281/zenodo.17599037 , 10.5281/zenodo.15698747 , 10.5281/zenodo.15254642 , 10.5281/zenodo.14883262 , 10.5281/zenodo.15585786

optTMT: A Shiny application to optimize any experimental design to minimize the TMT reporter ion interference

Abstract

This is the executable file containing the Shiny application optTMT. Its R package version with documentation and source code is available at https://github.com/mgerault/optTMT. By dowloading and install it on your Windows machine you will be able to obtain any optimal experimental design to minimize the TMT reporter interference for your proteomics experiment. The Shiny appliucation is also direclty usable at https://marc-antoinegerault.shinyapps.io/TMT_optimization/

Related Organizations
Keywords

Proteomics, TMT reporter ion interference

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average