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ZENODO
Dataset . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
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HISTOPANTUME: Histological Pan-cancer Tumor image dataset

Authors: Zamanitajeddin, Neda; Jahanifar, Mostafa; siraj, fouzia; Rajpoot, Nasir;

HISTOPANTUME: Histological Pan-cancer Tumor image dataset

Abstract

HISTOPANTUM is a comprehensive pan-cancer dataset of histology images categorized into Tumor and Non-Tumor classes over 4 different cancer types (domains). This dataset is designed to facilitate domain generalization analysis for tumor detection tasks, serving as a benchmark for foundation models and domain generalization algorithms. Dataset Overview The dataset comprises histology images sourced from The Cancer Genome Atlas (TCGA), spanning the following four cancer types: Colorectal Cancer Ovarian Cancer Stomach Cancer Uterus Cancer Image Specifications Original Resolution: 512 × 512 pixels images are extracted from 0.5 micron-per-pixel resolution. Processed Size: Images are resized to 224 × 224 pixels and saved as JPEG files. The dataset is provided in four zipped files, each corresponding to one cancer type. Within each zip file, images are organized into two subfolders: tumour non-tumour Each image filename encodes the originating slide and the patch position within the slide, following this naming convention: __.jpg Citation If you use this dataset in your research, please cite the following publication: @article{zamanitajeddin2024benchmarking, title={Benchmarking Domain Generalization Algorithms in Computational Pathology}, author={Zamanitajeddin, Neda and Jahanifar, Mostafa and Xu, Kesi and Siraj, Fouzia and Rajpoot, Nasir}, journal={arXiv preprint arXiv:2409.17063}, year={2024} } For further details, please refer to the linked publication.

Related Organizations
Keywords

Ovarian Neoplasms, Stomach Neoplasms, TCGA, domain generalization, Colorectal cancer, Benchmarking/classification, Cancer, Endometrial Neoplasms, computational pathology

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Related to Research communities
Cancer Research