.bed / .bim / .fam files for HGDP + 1KG data from gnomAD
Seth, Aishwarya;
.bed / .bim / .fam files for HGDP + 1KG data from gnomAD
From the gnomAD v3.1.2 release, we pull the HGDP + 1KG dataset. We drop related samples, & retain variants with AF > 1% & p-value of HWE < 10^(-12). This is done using Hail, with code available in the file GIANT_Extract_HGDP_1KG_Data.ipynb. The super population label file was generated by gnomAD. We plan to use this dataset to train ML algorithms that will assign ancestry labels if required during downstream analysis.
selected citations These citations are derived from selected sources.This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).0 popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.Average influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).Average impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.Average
selected citations
Citations provided by BIP!
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
Citations provided by BIP!popularityPopularity provided by BIP!
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
Popularity provided by BIP! 0
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