
Table legends: column_descriptions.docx: Extended description of columns in selected tables. 00_sample_metadata: Sample and experimental metadata pertaining to each LR-RNA-seq sample. 01_uma_gtf: Unfiltered merged annotation (UMA) GTF for all spliced intron chains discovered by each of the tools. 02_uma_mt: Metadata table for SQANTI QC, Recount3 support, protein prediction, and other relevant characteristics for each transcript in the UMA annotation used to filter transcripts. 03_poder_gtf: Final PODER GTF, including predicted CDSs for novel transcripts and annotated CDSs for known transcripts. 04_poder_mt: Metadata table for SQANTI QC, Recount3 support, protein prediction, and other relevant characteristics for each transcript in PODER. 06_poder_t_counts: PODER transcript counts in each sample as quantified by lr-kallisto. 07_poder_g_counts: PODER gene counts in each sample as quantified by lr-kallisto. 08_mage_t_counts_poder: Transcript counts for the MAGE RNA-seq dataset computed using the PODER annotation with kallisto. 09_mage_t_counts_gencode: Transcript counts for the MAGE RNA-seq dataset computed using the GENCODE annotation with kallisto. 10_mage_t_counts_enh: Transcript counts for the MAGE RNA-seq dataset computed using the Enhanced GENCODE annotation with kallisto. 11_astu: Allele-specific transcript usage results. 12_ase: Allele-specific expression results. 13_mage_tau: Tau values for Enhanced GENCODE transcripts computed on the MAGE RNA-seq dataset. 14_gwas_enrichments: GWAS enrichment results for ASTU genes overlapping GWAS genes. 16_inter_catalog_overlap: Boolean detection of transcripts across PODER, annotations (GENCODE, RefSeq) and other RNA-seq / LR-RNA-seq-derived transcript catalogs (CHESS, GTEx, ENCODE4). 17_personalized_hg38: Isoforms and their intron chains detected using personalized-GRCh38s. 18_enh_gencode: Enhanced GENCODE GTF with novel transcripts from PODER added to all annotated transcripts from GENCODE v47
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 0 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Average |
