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ZENODO
Dataset . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
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Example data used in tutorial of HEIG (v1.2.0)

Authors: Jiang, Zhiwen;

Example data used in tutorial of HEIG (v1.2.0)

Abstract

The repository contains example data used in tutorial of HEIG v1.2.0. Note, this data is not compatible with v1.0.0, and some options are supported in v1.1.0. HEIG is a statistical framework for efficiently conducting joint analysis for large-scale imaging and genetic data. The dataset has the following file structures: input images1: 500 simulated images images2: 500 simulated images genotype: genotype data in PLINK bfile misc: miscellaneous files ldr_sumstats: 19 LDR GWAS summary statistic files of the superior fronto-occipital fasciculus ld_regu8580: LD matrices with regularization {85%,80%}, including ~460,000 genotype array SNPs ld_regu7570: LD matrices with regularization {75%,70%}, including ~460,000 genotype array SNPs visualization: example files for visualization output fpca: results of functional PCA genotype: hail.MatrixTable of genotype data gwas: LDR GWAS results generated by HEIG herigc: results of heritability and (cross-trait) genetic correlation analysis images: preprocessed 1000 images in H5DF file ldr: LDRs constructed from 1000 images sumstats: preprocessed 19 LDR GWAS summary statistic files of the superior fronto-occipital fasciculus visualization: visualization results voxelgwas: voxel-level GWAS results The results in ouput are produced by data in input, which can verify if the user runs the code correctly.

Related Organizations
Keywords

Computational neuroscience, FOS: Biological sciences, Genetics

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average