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Supplemental data for reproducing "Faster model-based estimation of ancestry proportions"

Name: Supplemental data for reproducing "Faster model-based estimation of ancestry proportions"
Creator: Meisner, Jonas
Keywords: computational biology, ancestry estimation, genetics, bioinformatics

descriptionPublicationkeyboard_double_arrow_right Preprint 01 Jan 2024Publisher:Zenodo

Authors: Meisner, Jonas;

doi: 10.5281/zenodo.12683371 , 10.5281/zenodo.14106454 , 10.5281/zenodo.12683372

Supplemental data for reproducing "Faster model-based estimation of ancestry proportions"

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Abstract

Data and files for reproducing "Faster model-based estimation of ancestry proportions". - "fastmixture-v0.93.4.zip" contains the software version of 'fastmixture' used in the study.- "scripts.zip" contains Python scripts to simulate data and to plot demography and admixture figures.- "plots.zip" contains all plots created in the study.- "trees.zip" contains the trees, demographic models, and ground truths in the simulation study.- "data.zip" contains the processed datasets used in the study.- "results.zip" contains Q (ancestry proportions) and P (ancestral allele frequencies) files of runs for results.

Related Organizations

University of Copenhagen
Denmark
Copenhagen University Hospital
Denmark

Keywords

computational biology, ancestry estimation, genetics, bioinformatics

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