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Claim

PhotoBatch: Batch Processing/Event Detection for ABET II Touchscreen Operant Behaviour and Doric Fiber Photometry

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 24 Jan 2022Publisher:Zenodo
Authors: Palmer, Daniel;
Code repository: https://github.com/dpalmer9/PhotoBatch/tree/v1.3.0

doi: 10.5281/zenodo.13694094 , 10.5281/zenodo.7600469 , 10.5281/zenodo.8350199 , 10.5281/zenodo.7996391 , 10.5281/zenodo.7577052 , 10.5281/zenodo.7802968

PhotoBatch: Batch Processing/Event Detection for ABET II Touchscreen Operant Behaviour and Doric Fiber Photometry

Abstract

PhotoBatch 1.3.0 Release: Adds new functionality to the behavioural event filtering. Adds new baselining option. Additions: Added ability to define filter_arg as a variable name from ABET Task. Will grab float or int value from variable from closest previous reference in task to the event of interest. Added "prior" option to baselining. Data collected from the event prior --> event start window will be used to calculate baseline for z-scores. Fixes: Small modification to file parsing for Doric hdf5 files (Version 6) Updated output file naming scheme to support new filter contingencies

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