Isoform analysis Galaxy training with EWS-FLI1 example

The fastqs are subsampled from the following SRA: SRR8561337SRR8561334SRR8561335SRR8561332SRR8561333SRR8561347 The gtf file was reduced from https://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release_19/gencode.v19.annotation.gtf.gz and only lines with 'chr10' in first column were kept. The fasta file comes from https://hgdownload.soe.ucsc.edu/goldenPath/hg19/chromosomes/chr10.fa.gz

Related Organizations

École Polytechnique Fédérale de Lausanne EPFL
Switzerland

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