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ZENODO
Dataset . 2024
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2024
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2024
License: CC BY
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ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
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Datasets for: Integrative Mapping of Human CD8+ T Cell in Inflammation and Cancer

Research datakeyboard_double_arrow_right Dataset 09 Jan 2024Publisher:Ziwei Xue
Authors: Xue, Ziwei; Wu, Lize;

doi: 10.5281/zenodo.13382785 , 10.5281/zenodo.10472914 , 10.5281/zenodo.12542577 , 10.5281/zenodo.10472913

Datasets for: Integrative Mapping of Human CD8+ T Cell in Inflammation and Cancer

Abstract

Files for the integrated pan-disease CD8+ T cell atlas: huARdb_v2_GEX.CD8.all_genes.h5ad.gz : 19957 genes raw matrix huARdb_v2_GEX.CD8.hvg4k.h5ad : 4000 highly variable genes raw matrix huARdb_v2_GEX.CD8.hvg4k.X_gex.npy : scatlasavae model embedding huARdb_v2_GEX.CD8.clone_subtype.csv : clone type definition huARdb_v2_GEX.CD8.hvg4k.supervised.model. scatlasavae model checkpoint huARdb_v2_GEX.CD8.hvg4k.h5ad : Tex subset of 4000 highly variable genes raw matrix huARdb_v2_GEX.CD8.hvg4k.Tex.supervised.model. scatlasavae model checkpoint for the Tex subset Files for the TILs CD8+ T cell atlas adata_cd8_chu.h5ad. the Chu et al., 2023 Dataset adata_cd8_zheng.h5ad. The Zheng et al., 2021 Dataset Files for the transfer (query) datasets: Zhang_LC.CD8_T.h5ad Luoma_HNSCC_TIL.CD8_T.h5ad Luoma_HNSCC_PBMC.CD8_T.h5ad Watson_MELA.CD8_T.h5ad Bassez_BC.cohort1.CD8_T.h5ad Bi_RCC.CD8_T.h5ad Caushi_NSCLC.CD8_T.h5ad Liu_TNBC.CD8_T.h5ad Borràs_2024_Colorectal_cancer.CD8_T.h5ad Garner_2023.h5ad Vorkas_2022_MAIT.h5ad

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 1
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    		 Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    		 Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
Related to Research communities
Cancer Research