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Conference object . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Conference object . 2024
License: CC BY
Data sources: Datacite
ZENODO
Conference object . 2024
License: CC BY
Data sources: Datacite
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Automated Completion of Segmented Fragments of Macrophages using Weighted Dilation and Erosion in 2D+time Microscopy Videos

Authors: Seol Ah, Park; Karol, Mikula;

Automated Completion of Segmented Fragments of Macrophages using Weighted Dilation and Erosion in 2D+time Microscopy Videos

Abstract

This paper presents a method for automated completion of segmented fragments in 2D+time microscopy movies. This method aims to automatically and accurately compute morphological features for segmented macrophages that are critical for understanding their phenotypic characteristics. In the situation that segmentation results in fragments corresponding to a single macrophage, it becomes challenging to determine whether these fragments belong to the same macrophage. Consequently, it is essential to complete the fragments for accurate quantitative analysis of morphology.To achieve this, we propose a method based on weighted dilation and erosion (WDE) in the level-set formulation. By regulating the speed of the level lines based on local image intensity and thresholds calculated from the local Otsu's method, this approach effectively integrates fragmented segments while preserving the overall macrophage shape. The efficacy of the method is demonstrated through both visual and quantitative assessments, which indicate its ability to accurately complete segmented macrophages across a range of shapes and intensity levels in the images. Furthermore, the method has been shown to improve the accuracy of quantitative assessments when compared to ground truth images.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green