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choderalab/yank: 0.23.1 - Multi-Experiment and Online Bug

Authors: Andrea Rizzi; John Chodera; Levi Naden; Kyle Beauchamp; Patrick Grinaway; Bas Rustenburg; Steven Albanese; +1 Authors

choderalab/yank: 0.23.1 - Multi-Experiment and Online Bug

Abstract

Fixed bug in MultiExperimentAnalyzer where a path ending in the folder separator (e.g. /) caused all files to write to the same place. Fixed bug where increasing number of iterations did not continue experiment if online analysis was turned on and previously hit the max number of iterations Fixed bug where online analysis and harmonic unbiasing caused MBAR to not form due to misformed initial_f_k MultiExperimentAnalyzer now gracefully traps an error caught by one experiment without crashing others Fixed bug in MultiStateReporter when there were unsampled thermodynamic states as end-states but they referenced sampled thermodynamic states for their standard system

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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