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chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 28 Sep 2017Publisher:Zenodo
Authors: Ankenbrand, Markus J.; Pfaff, Simon; Terhoeven, Niklas; Qureischi, Musga; Gündel, Maik; Weiss, Clemens L.; Hackl, Thomas; +1 Authors
Code repository: https://github.com/chloroExtractorTeam/chloroExtractor/tree/v0.2_interactive

doi: 10.5281/zenodo.1148955 , 10.5281/zenodo.1147434 , 10.5281/zenodo.998262 , 10.5281/zenodo.1179297 , 10.5281/zenodo.883594 , 10.5281/zenodo.1288679

chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data

Abstract

The authors MJA and SP contributed equally to this work. MJA was supported by a grant of the German Excellence Initiative to the Graduate School of Life Sciences, University of Würzburg.

The chloroExtractor is a perl based program which provides a pipeline for DNA extraction of chloroplast DNA from whole genome plant data.

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Keywords

assembly, chloroplast, k-mer, genome

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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