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ZENODO
Software . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Software . 2024
License: CC BY
Data sources: Datacite
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phillipnicol/scDist: scDist v1.1.0

Authors: Phillip Nicol;

phillipnicol/scDist: scDist v1.1.0

Abstract

This update contains new functionality for post-hoc analysis and simulated data. New functionality: The distGenes function can be used to visualize the genes associated with the perturbation. The generation of simulated data is simplified with the simData function. The scDist_tree function performs the analysis at different resolutions of a given clustering. condition_v_celltype_distance compares the condition perturbation to the inter-cell-type distances, providing a possible way to diagnose issues in annotation. Changes to existing functionality: The scDist function now has a weights argument to allow different genes to be weighted differently in the calculation of the distance.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average