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These scripts demonstrate the use of IMP, MODELLER, and PMI in the modeling of the Nup84 complex using 286 DSS/EDC chemical cross-links and an electron microscopy (EM) 2D class average. First, MODELLER is used to generate initial structures for the individual components in the Nup84 complex. Then, IMP is used to model these components using DSS/EDC crosslinks and the electron microscopy 2D class average for the entire Nup84 complex. For more information about how to reproduce this modeling, see the Sali lab website or the README file.
Chemical crosslinks, PMI, MODELLER, Electron microscopy class average, Integrative Modeling Platform (IMP)
Chemical crosslinks, PMI, MODELLER, Electron microscopy class average, Integrative Modeling Platform (IMP)
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