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ZENODO
Dataset . 2018
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2018
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2018
License: CC BY
Data sources: ZENODO
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(Tm3-Cis) Simulation Cer160_9_Popc_512_Tm3_10_5Up_5Down_Nacl_150Mm_310K (Rep2)

Authors: Hector Martinez-Seara;

(Tm3-Cis) Simulation Cer160_9_Popc_512_Tm3_10_5Up_5Down_Nacl_150Mm_310K (Rep2)

Abstract

System description ------------------- - Title: (TM3-CIS) Simulation CER160_9_POPC_512_TM3_10_5up_5down_NaCl_150mM_310K (rep2) - Description: Simulation intake nine ceramides (CER16) to a POPC membrane containing ten LAPTM4B-TM3 peptides using charmm36 at 310K. (TM3 peptides have cis peptides bonds by mistake) - MD engine: gromacs 5.0.5-dev-20150319-0bec922 - Force field: charmm36 - Temperature: 310K - Simulation time: 1000ns - Saving frequency: 100ps - Molecular content: TM3 10 POPC 512 CER160 9 SOL 34248 NA 102 CL 92 - Other information: * Simulations containing 9 CER16 in the water phase initially. * Membrane containing LAPTM4B TM3 peptides. - Problems * By mistake some peptides bonds in TM3 are in CIS configuration

Keywords

Charmm36, ceramide, CER16, POPC, micelle, Transmembrane peptide, LAPTM4B

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