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Dataset . 2018
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Dataset . 2018
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Dataset . 2018
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Genome Assemblies For "Versatile Genome Assembly Evaluation With Quast-Lg"

Research datakeyboard_double_arrow_right Dataset 29 Jan 2018 English Publisher:Zenodo
Authors: Alla Mikheenko; Andrey Prjibelski; Vladislav Saveliev; Dmitry Antipov; Alexey Gurevich;

doi: 10.5281/zenodo.1163382 , 10.5281/zenodo.1240963 , 10.5281/zenodo.1163368

Genome Assemblies For "Versatile Genome Assembly Evaluation With Quast-Lg"

Abstract

De novo genome assemblies of Yeast_PB (S. cerevisiae, genome size: 12.1 Mb): Canu, FALCON, Flye, MaSuRCA (from Illumina pair-ends and PacBio SMRT) Yeast_NP (S. cerevisiae, genome size: 12.1 Mb): Canu, Flye, MaSuRCA (from Illumina pair-ends and Oxford Nanopores) Worm_PB (C. elegans,genome size: 100.3 Mb): Canu, FALCON, Flye, MaSuRCA (from Illumina pair-ends and PacBio SMRT) Fly_MP (D. melanogaster, genome size: 137.6 Mb): ABySS2, MaSuRCA, Meraculous, Platanus, SOAPdenovo2, SPAdes (from Illumina pair-ends and mate-pairs) Human_MP (H. sapiens, genome size: 3.1 Gb): UpperBound assembly only (from Illumina pair-ends and mate-pairs) Human_NP (H. sapiens, genome size: 3.1 Gb): UpperBound assembly only (from Illumina pair-ends and Oxford Nanopores) Each pack is accompanied with the upper bound assembly created with QUAST-LG (for computing theoretical limits on assembly correctness and completeness for a particular genome and set of reads). For more information and other human datasets assemblies please visit http://cab.spbu.ru/software/quast-lg/ or write to quast.support@cab.spbu.ru.

Related Organizations
Keywords

genome assembly, genome assembly evaluation

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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