nipy/nipype: Nipype - v1.0.0

Authors: Gorgolewski, Krzysztof J.; Esteban, Oscar; Ziegler, Erik; Notter, Michael Philipp; Burns, Christopher; Ellis, David Gage; Johnson, Hans; +143 Authors

Gorgolewski, Krzysztof J.; Esteban, Oscar; Ziegler, Erik; Notter, Michael Philipp; Burns, Christopher; Ellis, David Gage; Johnson, Hans; Manhães-Savio, Alexandre; Hamalainen, Carlo; Jarecka, Dorota; Yvernault, Benjamin; Markiewicz, Christopher J.; Salo, Taylor; Waskom, Michael; Clark, Daniel; Wong, Jason; Loney, Fred; Madison, Cindee; Modat, Marc; Goncalves, Mathias; Dewey, Blake E; Clark, Michael G.; Dayan, Michael; Keshavan, Anisha; Clark, Dav; Pinsard, Basile; Gramfort, Alexandre; Berleant, Shoshana; Nielson, Dylan M.; Varoquaux, Gael; Cipollini, Ben; Nielson, Dylan M.; Markello, Ross; Rokem, Ariel; Wassermann , Demian; Halchenko, Yaroslav O.; Visconti di Oleggio Castello, Matteo; Kaczmarzyk, Jakub; Moloney, Brendan; Hanke, Michael; Horea, Christian; Bougacha, Salma; Gilles de Hollander; Mordom, David; Buchanan, Colin; Tungaraza, Rosalia; Mancini, Matteo; Pauli, Wolfgang M.; Iqbal, Shariq; Sikka, Sharad; Schwartz, Yannick; Malone, Ian B.; DuPre, Elizabeth; Frohlich, Caroline; Welch, David; Forbes, Jessica; Watanabe, Aimi; Cumba, Chad; Huntenburg, Julia M.; Eshaghi, Arman; Kastman, Erik; Ginsburg, Daniel; Schaefer, Alexander; Acland, Benjamin; Kent, James; Perez-Guevara, Martin; Gillman, Ashley; Bougacha, Salma; Forbes, Jessica; DuPre, Elizabeth; Nichols, B. Nolan; Giavasis, Steven; Jordan, Kesshi; Kleesiek, Jens; Erickson, Drew; Küttner, René; Haselgrove, Christian; Correa, Carlos; Ghayoor, Ali; Millman, Jarrod; Haehn, Daniel; Lampe, Leonie; Lai, Jeff; Zhou, Dale; Blair, Ross; Glatard, Tristan; Renfro, Mandy; Liu, Siqi; Kahn, Ari E.; Triplett, William; Jordan, Kesshi; Stadler, Jörg; Kong, Xiang-Zhen; Hallquist, Michael; McDermottroe, Conor; Chetverikov, Andrey; Salvatore, John; Mertz, Fred; Park, Anne; Poldrack, Russell; Jordan, Kesshi; Craddock, R. Cameron; Inati, Souheil; Hinds, Oliver; Cooper, Gavin; Perkins, L. Nathan; Tambini, Arielle; Marina, Ana; Mattfeld, Aaron; Noel, Maxime; Lukas Snoek; Matsubara, K; Cheung, Brian; Gerhard, Stephan; Rothmei, Simon; Urchs, Sebastian; Pannetier, Nicolas; Durnez, Joke; Geisler, Daniel; Floren, Andrew; Sharp, Paul; Mancini, Matteo; Weinstein, Alejandro; Broderick, William; Saase, Victor; Andberg, Sami Kristian; Harms, Robbert; Khanuja, Ranjeet; Schlamp, Kai; Arias, Jaime; Visconti di Oleggio Castello, Matteo; Papadopoulos Orfanos, Dimitri; Tarbert, Claire; De La Vega, Alejandro; Nickson, Thomas; Brett, Matthew; Dubois, Mathieu; Falkiewicz, Marcel; Podranski, Kornelius; Pellman, John; Linkersdörfer, Janosch; Varada, Jan; Schwabacher, Isaac; Flandin, Guillaume; Liem, Franz; Pérez-García, Fernando; Shachnev, Dmitry; McNamee, Daniel; Davison, Andrew; Ghosh, Satrajit;

Code repository: https://github.com/nipy/nipype/tree/1.0.3

doi: 10.5281/zenodo.1160610 , 10.5281/zenodo.1237959 , 10.5281/zenodo.1305286

nipy/nipype: Nipype - v1.0.0

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1.0.0 (January 25, 2018) Full changelog FIX: PBS plugin submissions (https://github.com/nipy/nipype/pull/2344) FIX: Graph plugins submissions (https://github.com/nipy/nipype/pull/2359) FIX: Logging error if % in interface command (https://github.com/nipy/nipype/pull/2364) FIX: Robustly handled outputs of 3dFWHMx across different versions of AFNI (https://github.com/nipy/nipype/pull/2373) FIX: Cluster threshold in randomise + change default prefix (https://github.com/nipy/nipype/pull/2369) FIX: Errors parsing $DISPLAY (https://github.com/nipy/nipype/pull/2363) FIX: MultiProc starting workers at dubious wd (https://github.com/nipy/nipype/pull/2368) FIX: Explicitly collect MultiProc job IDs (https://github.com/nipy/nipype/pull/2378) FIX: Correct Windows environment canonicalization (https://github.com/nipy/nipype/pull/2328) FIX: Linked libraries (https://github.com/nipy/nipype/pull/2322) REF+FIX: Move BIDSDataGrabber to interfaces.io + fix correct default behavior (https://github.com/nipy/nipype/pull/2336) REF+MAINT: Simplify hashing (https://github.com/nipy/nipype/pull/2383) MAINT: Cleanup Interfaces base (https://github.com/nipy/nipype/pull/2387) MAINT: Cleanup EngineBase (https://github.com/nipy/nipype/pull/2376) MAINT: Cleaning / simplify Node (https://github.com/nipy/nipype/pull/2325) MAINT+ENH: Update and extend MRtrix3 interfaces (https://github.com/nipy/nipype/pull/2338) ENH: Add AFNI interface for 3dConvertDset (https://github.com/nipy/nipype/pull/2337) ENH: Allow specific interface command prefixes (https://github.com/nipy/nipype/pull/2379) STY: Cleanup of PEP8 violations (https://github.com/nipy/nipype/pull/2358) STY: Cleanup of trailing spaces and adding of missing newlines at end of files (https://github.com/nipy/nipype/pull/2355) STY: Apply yapf to codebase (https://github.com/nipy/nipype/pull/2371) DOC: Updated guide for contributing (https://github.com/nipy/nipype/pull/2393)

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Keywords

neuroimaging, workflow, pipeline

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