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ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
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Design of linear and cyclic peptide binders

Authors: Bryant, Patrick;

Design of linear and cyclic peptide binders

Abstract

The data is compressed with zstd: https://github.com/facebook/zstd and tar. To uncompress do: tar --use-compress-program full/path/to/zstd -xvf file.tar.zst PDB files of predicted protein-peptide complexes from the design process: 1.1G 1ssc_untargeted_cyclic_afm.tar.zst 1.1G 1ssc_untargeted_cyclic.tar.zst1.1G 1ssc_untargeted_linear_afm.tar.zst1.1G 1ssc_untargeted_linear.tar.zst Selected PDB files of predicted protein-peptide complexes from the design process: (440 KB each). 1ssc_adversarial_linear_sel, 1ssc_tp_cyclic_sel, 1ssc_tp_linear_sel Metrics: 1ssc_cyclic_merged_with_solubility.csv - all cyclic design metriccs 1ssc_linear_merged_with_solubility.csv - all linear design metriccs 1ssc_linear_adversarial_sel.csv - adversarial selection for linear design 1ssc_linear_tp_sel.csv - top selection for linear design linear_spr_results_summary.csv - SPR affinities for linear top and adversarial selection (Kd) 1ssc_cyclic_tp_sel.csv - top selection for cyclic design cyclic_spr_results_summary.csv - SPR affinities for the experimentally evaluated cyclic peptides (Kd)

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average