This is the data underlying the analysis for the coral experiment described in the article: "Microbiome and metabolic dynamics shape coral post-stress recovery" It contains: The endosymbiotic symbiodiniaceae density calculated to surface area per sample and analytical replicate 4-6. Bactiral taxa identfied and the number of sequence reads assign to that ID (ASV) for each sample. Meta data for the samples collected, linking the sample number to experimental treatments and replicates. Lipid data including the concentration of fatty acids in each sample collected. Protein concentrations in each sample including sample (coral nubin) surface area