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AlphaFold structures with AlphaMissense scores

Authors: Hegedűs, Tamás;

AlphaFold structures with AlphaMissense scores

Abstract

These repository provides: A file including pdb.gz files for human protein structures from the AlphaFoldDb with occupancy and temperature factor columns set to residue-wise mean of AlphaMissense scores. A PyMOL plugin file (coloram.py) for coloring these structures. Python scripts and additional files (e.g. Jinja2 templates, matplotlib styles) are in pub.zip. Please see details at https://alphamissense.hegelab.org Disclaimer: The AlphaMissense Database and other information provided on or linked to this site is for theoretical modelling only, caution should be exercised in use. It is provided "as-is" without any warranty of any kind, whether express or implied. For clarity, no warranty is given that use of the information shall not infringe the rights of any third party (and this disclaimer takes precedence over any contrary provisions in the Google Cloud Platform Terms of Service). The information provided is not intended to be a substitute for professional medical advice, diagnosis, or treatment, and does not constitute medical or other professional advice. Data contained within the AlphaMissense Database is provided for non-commercial research use only under CC BY-NC-SA 4.0 license. DeepMind - AlphaMissense: https://doi.org/10.1126/science.adg7492

Related Organizations
Keywords

missense mutation prediction, AlphaFold, protein structure, AlphaMissense

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
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