Identification of clinically relevant T cell receptors for personalized T cell therapy using combinatorial algorithms
Pétremand, Rémy; Chiffelle, Johanna; Barras, David; Capt, Charlotte; Dangaj, Denarda; Harari, Alexandre; Arnaud, Marion;
Identification of clinically relevant T cell receptors for personalized T cell therapy using combinatorial algorithms
Single-cell RNA (scRNA) and single-cell TCR (scTCR)-sequencing data data for patients number 11, 12 and 14 from the article " Identification of clinically relevant T-cell receptors for personlized T-cell therapy". Each compressed file contains two subfolders. One is for the scRNA-seq (GEX-sequencing) and the other for the scTCR-seq (VDJ-sequencing). In the original article, scRNA-seq and scTCR-seq were aligned to the GRCh38 reference genome using cellranger count (10X Genomics, version 3.0.1) and vdj (10X Genomics, version 3.1.0) respectively. The subsequent data processing was performed using Seurat library (V.4.3.0) on R Statistical Software (V.4.0.3).
- University of Lausanne Switzerland
- University Hospital of Lausanne Switzerland
selected citations These citations are derived from selected sources.This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).1 popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.Average influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).Average impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.Average
selected citations
Citations provided by BIP!
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
Citations provided by BIP!popularityPopularity provided by BIP!
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
Popularity provided by BIP! 1
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