Data from: Genome-scale annotation of protein binding sites via language model and geometric deep learning
Yuan, Qianmu; Yang, Yuedong;
Data from: Genome-scale annotation of protein binding sites via language model and geometric deep learning
The dataset contains the training and test sets of protein binding sites with DNA, RNA, peptide, protein, ATP, HEM, Zn2+, Ca2+, Mg2+ and Mn2+. Each protein is associated with 3 lines indicating the protein name (PDB accession code and chain), sequence and residue labels (0 for non-binding and 1 for binding), respectively. The ESMFold-predicted structures are also provided.
- Sun Yat-sen University China (People's Republic of)
bioinformatics, protein binding sites
bioinformatics, protein binding sites
selected citations These citations are derived from selected sources.This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).1 popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.Average influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).Average impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.Average
selected citations
Citations provided by BIP!
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
Citations provided by BIP!popularityPopularity provided by BIP!
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
Popularity provided by BIP! 1
Average
Average
Average