Developing a DNA metabarcoding method to identify diet taxa in Neotropical foxes.
Developing a DNA metabarcoding method to identify diet taxa in Neotropical foxes.
Corresponding authors: *A. Iriarte (airiarte@higiene.edu.uy); *M. Cosse (mcosse@iibce.edu.uy) Generated raw reads (Fastq files*): Crab-eating fox feces reads from the cold season: CTV1-LGTRN1P_S9_L001_R1, CTV1-LGTRN1P_S9_L001_R2 Crab-eating fox feces reads from the warm season: CTV2-LGTRN2P_S10_L001_R1, CTV2-LGTRN2P_S10_L001_R2 Pampas fox feces reads from the cold season: LGV1P-CRRTN1P_S7_L001_R1, LGV1P-CRRTN1P_S7_L001_R2 Pampas fox feces reads from the warm season: LGV2P-CRRTN2P_S8_L001_R1, LGV2P-CRRTN2P_S8_L001_R2 *Sequencing was done in an Illumina MiSeq platform (Illumina, Inc., San Diego, CA, USA) at the Institute Pasteur, Montevideo. 12S Database (Database.tgz): The reference sequence database comprises vertebrate complete mitochondrial genomes and sequences of the 12S rRNA gene. These sequences were available at GenBank (https://www.ncbi.nlm.nih.gov) in December 2020.
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