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ZENODO
Preprint . 2024
License: CC BY
Data sources: ZENODO
ZENODO
Preprint . 2024
License: CC BY
Data sources: Datacite
ZENODO
Preprint . 2024
License: CC BY
Data sources: Datacite
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Whole-genome sequences of eight strains of the Ralstonia solanacearum species complex associated with bacterial wilt disease in sub-Saharan Africa.

Authors: MWANGI, MARY N; MAGEMBE, ERIC; SHARMA, KALPANA; CELLIER, GILLES; JAVEGNY, STEPHANIE; GHISLAIN, MARC; JONES, JONATHAN D G;

Whole-genome sequences of eight strains of the Ralstonia solanacearum species complex associated with bacterial wilt disease in sub-Saharan Africa.

Abstract

Bacterial wilt, caused by the Ralstonia solanacearum species complex (RSSC), is one of the most destructive diseases of potato in sub-tropical regions. This study reports the whole-genome shotgun sequences of eight RSSC strains, isolated from potato (Solanum tuberosum L.), Pelargonium, Capsicum annuum, Nicotiana tabacum, symptomatic for bacterial wilt in Sub-Saharan Africa. Sequencing was done on the Illumina NovaSeq 6000 and genomic sequences were deposited in NCBI GenBank under the BioProject PRJNA1070535. R. solanacearum strains were assembled into between 84 and 147 contigs with total genome sizes of between 5.23 Mb and 5.62 Mb in length and GC content between 66.49% and 67.08%. These data will provide a useful resource for future studies into RSSC and associated diseases of important crop plants.

The sequencing of the bacterial strains was supported by GetGenome and The Sainsbury Laboratory, Norwich, UK, with contributions from the Gatsby Charitable Foundation, the Biotechnology, Biological Sciences Research Council (BBSRC) and The University of East Anglia.

Related Organizations
Keywords

Genome, Sub-Saharan Africa, NCBI, Ralstonia solanacearum, Agriculture, Kenya, WGS, bacteria wilt, Solanum tuberosum

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green