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Dataset . 2024
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Dataset . 2024
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Dataset . 2024
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Dataset . 2024
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ZENODO
Dataset . 2024
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2024
License: CC BY
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Claim

Organelle Genome Utilities benchmark data

Research datakeyboard_double_arrow_right Dataset 23 Feb 2024 English Publisher:Zenodo
Authors: Ping, Wu;

doi: 10.5281/zenodo.13890258 , 10.5281/zenodo.10695931 , 10.5281/zenodo.13371267 , 10.5281/zenodo.12772923 , 10.5281/zenodo.10695930

Organelle Genome Utilities benchmark data

Abstract

test_Lamiaceae.zip: Benchmark result of Lamiaceae plastid data. Includes original sequences and analyze result from OGU.test_1M_out.zip: Benchmark result of 1 million random GenBank records. Includes original sequences and analyze result from OGU.test_308_angiosperm.zip: Benchmark result of 308 angiosperm family's plastid genomes. Includes original sequences and analyze result from OGU.test_rodents.zip: Benchmark result of 307 mitochondria genomes from rodents. Includes original sequences and analyze result from OGU.CDS and spacer tree of angiosperm plastid data.zip: Sequences and maximum likelihood trees of angiosperm plastid CDS and spacers. Built with IQTREE2. OGU-source code.zip: three versions of source code of OGU. 

Keywords

organelle genome, evolution, bioinformatics

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average