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ZENODO
Dataset . 2018
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Raw Diffraction Images Of Leukotriene B4 Receptor Blt1

Authors: Hori, Tetsuya; Hirata, Kunio; Yamashita, Keitaro; Kawano, Yoshiaki; Yamamoto, Masaki; Yokoyama, Shigeyuki;

Raw Diffraction Images Of Leukotriene B4 Receptor Blt1

Abstract

Diffraction images of Leukotriene B4 receptor (BLT1) in complex with antagonist BIIL260, a chemical bearing a benzamidine moiety. BLT1 is one of class-A G-protein coupled receptor (GPCR), and the bound benzamidine moiety mimics a sodium ion-centered water cluster of BLT1 that is considered to exist in many class-A GPCRs. The bound benzamidine moiety stabilizes the inactive state of BLT1, and BIIL260 exhibits the characteristics of an inverse agonist for BLT1. Small-wedge (1296 crystals, 2.5°/crystal) datasets collected from loop-harvested microcrystals using EIGER X 9M detector at a wavelength of 1 Å on BL32XU, SPring-8. The crystals belonged to space group P22121 with unit cell parameters a=69.6, b=77.6, c=135.5 Å. Finally, 494 datasets were merged at 3.7 Å resolution in the published result (Hori et al. Nature Chemical Biology, 2018; PDB code: 5X33) using KAMO; see processing note https://github.com/keitaroyam/yamtbx/wiki/Processing-BLT1-data-(5X33) Note The master.h5 files were modified; see https://github.com/keitaroyam/yamtbx/blob/master/doc/eiger-en.md To further reduce total file size, flatfield data of master.h5 were removed and saved in a file in each directory (linked from master.h5 files). Most frames have lipid rings.

{"references": ["https://github.com/keitaroyam/yamtbx/wiki/Processing-BLT1-data-(5X33)"]}

Related Organizations
Keywords

x-ray diffraction, bl32xu, spring-8, protein crystal, small wedge

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
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