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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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SiteMap pockets for the PDBbind dataset

Research datakeyboard_double_arrow_right Dataset 01 Dec 2023Publisher:Zenodo
Authors: PALERMO, GIANLUCA; Bocchi, Giovanni; Talarico, Carmine; GADIOLI, DAVIDE; PEDRETTI, ALESSANDRO;

doi: 10.5281/zenodo.10245051 , 10.5281/zenodo.10245052

SiteMap pockets for the PDBbind dataset

Abstract

This dataset includes the protein pockets identified by using the SITEMAP approach [SITEMAP] for the PDBbind v.2020 dataset. Only the proteins that were automatically processed by the tool, without generating any error, are included here. [SITEMAP] T. Halgren, "New Method for Fast and Accurate Binding- site Identification and Analysis," Chemical Biology & Drug Design, vol. 69, no. 2, pp. 146–148, Feb. 2007, doi: 10.1111/j.1747-0285.2007.00483.x.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
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Average