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DessimozLab/OmaStandalone: 2.6.0

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 27 Nov 2019Publisher:Zenodo
Authors: Adrian Altenhoff; Christophe Dessimoz; Alex WV; Ge Tan;

doi: 10.5281/zenodo.10179040 , 10.5281/zenodo.8383099 , 10.5281/zenodo.3555595 , 10.5281/zenodo.3555594 , 10.5281/zenodo.5094308

DessimozLab/OmaStandalone: 2.6.0

Abstract

Summary of Changes from 2.5.0 to 2.6.0 New features: produce orthoxml files according to v0.5 of orthoxml (https://github.com/qfo/orthoxml/releases/tag/v0.5) Map-SeqNum-ID.txt contains an additional column indicating which proteins were selected as main isoforms. Bug Fixes: exclude all but main isoform variant from the HierarchicalGroups.orthoxml output (https://github.com/DessimozLab/OmaStandalone/issues/8) fixes an issue with parsing splicing information for genomes with many splicing variants. minor improvements in the documentation.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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