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Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex

Authors: Minghao Chen; Thanh N. Nguyen; Xuefeng Ren; Grace Khuu; Annan S. I. Cook; Yuanchang Zhao; Ahmet Yildiz; +2 Authors

Structure and activation of the human autophagy-initiating ULK1C:PI3KC3-C1 supercomplex

Abstract

Abstract The Unc-51-like kinase protein kinase complex (ULK1C) is the most upstream and central player in the initiation of macroautophagy in mammals. Here, we determined the cryo-electron microscopy structure of the human ULK1C core at amino-acid-level resolution. We also determined a moderate-resolution structure of the ULK1C core in complex with another autophagy core complex, the class III phosphatidylinositol 3-OH kinase complex I (PI3KC3-C1). We show that the two complexes coassemble through extensive contacts between the FIP200 scaffold subunit of ULK1C and the VPS15, ATG14 and BECN1 subunits of PI3KC3-C1. The FIP200:ATG13:ULK1 core of ULK1C undergoes a rearrangement from 2:1:1 to 2:2:2 stoichiometry in the presence of PI3KC3-C1. This suggests a structural mechanism for the initiation of autophagy through formation of a ULK1C:PI3KC3-C1 supercomplex and dimerization of ULK1 on the FIP200 scaffold.

Country
United States
Keywords

Models, Molecular, Intracellular Signaling Peptides and Proteins (mesh), 34 Chemical Sciences (for-2020), Autophagy-Related Proteins, 11 Medical and Health Sciences (for), Article, 34 Chemical sciences (for-2020), Models, Class III Phosphatidylinositol 3-Kinases (mesh), 31 Biological sciences (for-2020), Protein Binding (mesh), Autophagy, Humans, Autophagy-Related Protein-1 Homolog, Autophagy-Related Proteins (mesh), Cryoelectron Microscopy (mesh), Developmental Biology (science-metrix), 1.1 Normal biological development and functioning (hrcs-rac), Humans (mesh), 31 Biological Sciences (for-2020), Beclin-1 (mesh), 03 Chemical Sciences (for), Cryoelectron Microscopy, Intracellular Signaling Peptides and Proteins, Adaptor Proteins, Autophagy (mesh), Autophagy-Related Protein-1 Homolog (mesh), Class III Phosphatidylinositol 3-Kinases, 3101 Biochemistry and Cell Biology (for-2020), 06 Biological Sciences (for), Molecular (mesh), Adaptor Proteins, Vesicular Transport, Vesicular Transport (mesh), 32 Biomedical and clinical sciences (for-2020), Beclin-1, Biophysics (science-metrix), Protein Binding

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    selected citations
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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    15
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
15
Top 10%
Average
Top 10%
Green
hybrid