The Helicobacter pylori Genome Project (HpGP) Phase1 dataset and 255 H. pylori population reference dataset

Name: The Helicobacter pylori Genome Project (HpGP) Phase1 dataset and 255 H. pylori population reference dataset
Keywords: 3. Good health

Wang, Difei; Luo, Wen; Jones, Kristie; Thorell, Kaisa; Camargo, M. Constanza; Rabkin, Charles S.

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Dataset . 2023

License: CC BY

Data sources: Datacite

ZENODO

Dataset . 2023

License: CC BY

Data sources: Datacite

The Helicobacter pylori Genome Project (HpGP) Phase1 dataset and 255 H. pylori population reference dataset

Research datakeyboard_double_arrow_right Dataset 11 Dec 2023Embargo end date: 20 Dec 2023Publisher:Zenodo

Authors: Wang, Difei; Luo, Wen; Jones, Kristie; Thorell, Kaisa; Camargo, M. Constanza; Rabkin, Charles S.;

doi: 10.5281/zenodo.10048270 , 10.5281/zenodo.10048320

The Helicobacter pylori Genome Project (HpGP) Phase1 dataset and 255 H. pylori population reference dataset

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Abstract

This repository holds the HpGP Phase 1 genomic dataset for Hp26695 and 1011 study samples. All 1012 genomic sequences were annotated using the NCBI Prokaryotic Genome Annotation Pipeline(PGAP). Also, it has 255 curated public available H. pylori genomic sequences used for population structure analysis in Thorell et al. Nature Communications, 14:8184 (2023). You can check the NCBI BioProject website for the latest annotation and sequence updates. https://www.ncbi.nlm.nih.gov/bioproject/?term=HpGP Please cite the above-mentioned paper if you use the data.

1 Research products, page 1 of 1

The Helicobacter pylori genome project: insights into H. pylori population structure from analysis of a worldwide collection of complete genomes
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