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Software . 2021
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Software . 2023
License: CC BY
Data sources: ZENODO
ZENODO
Software . 2023
License: CC BY
Data sources: Datacite
ZENODO
Software . 2021
Data sources: ZENODO
ZENODO
Software . 2023
License: CC BY
Data sources: Datacite
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Palmer Lab Heterogeneous Stock Rats Genotyping Pipeline

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 15 Nov 2021Publisher:Zenodo
Authors: Chen, Denghui; Chitre, Apurva; Cheng, Riyan; Peng, Beverly; Polesskaya, Oksana; Palmer, Abraham;

doi: 10.5281/zenodo.5703420 , 10.5281/zenodo.6621800 , 10.5281/zenodo.10002191

Palmer Lab Heterogeneous Stock Rats Genotyping Pipeline

Abstract

The third version of Palmer Lab's HS Rats Genotyping Pipeline v3.0.0. Acceptable sequencing data: Riptide library prep lc-WGS, and ddGBS sequences Genotype calling and imputation: STITCH niteration=2 with a high quality consensus reference panel Variants filtering: Keep high confident SNPs based on INFO score, and discard some identified BAD SNPs positions

If you use this pipeline or use data generated by this pipeline, please cite it as below.

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visibility
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
1
Average
Average
Average
12