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ZENODO
Other ORP type . 2023
Data sources: ZENODO
ZENODO
Other ORP type . 2023
Data sources: Datacite
ZENODO
Other ORP type . 2023
Data sources: Datacite
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Computational materials for "Negative Membrane potential accelerates sugar uptake by stabilizing the outward-facing conformation of the Na+/glucose symporter vSGLT"

Authors: Naughton, Fiona; Grabe, Michael; Marcoline, Frank;

Computational materials for "Negative Membrane potential accelerates sugar uptake by stabilizing the outward-facing conformation of the Na+/glucose symporter vSGLT"

Abstract

Materials used for running of MD simulations and computational model calculations described in the article: Farha Khan, Matthias Elgeti, Samuel Grandfield, Aviv Paz, Fiona B. Naughton, Frank V. Marcoline, Thorsten Althoff, Natalia Ermolova, Ernest M. Wright, Wayne L. Hubbell, Michael Grabe, Jeff Abramson "Negative Membrane potential accelerates sugar uptake by stabilizing the outward-facing conformation of the Na+/glucose symporter vSGLT". 2023. init_vSGLT[+/-]na.gro: Initial coordinate files for production molecular dynamics simulation runs of vSGLT with (+na) and without (-na) sodium bound md_vSGLT[+/-]na_[01/02/03].tpr: Simulation input files in Gromacs 2020.6 format for production MD runs of vSGLT starting with (+na) or without (-na) sodium in the binding site; three repeats (01,02,03) with different initial velocities md_vSGLT[+/-]na_[01/02/03].gro: Final snapshots at 100ns for each MD run above KhanMathModel08.20.2023.mmd: Berkeley Madonna (Version 10) code for 5 state model of transport; will reproduce Figure 6 panels b, c and d. vSGLT_gatingcharge.solv.in: code for calculating gating charges vSGLT_[inward/outward]-facing3.orient1.pqr: structures used in gating charge calculation Associated experimental data can be found at 10.5281/zenodo.8431613. 

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average