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Environmental DNA reflects spatial distribution of a rare turtle in a lentic wetland assisted colonisation site

Authors: Nordstrom, Bethany; Budd, Alyssa; Byrne, Margaret; Cornish, Caitlin; Kuchling, Gerald; Mitchell, Nicola; Jarman, Simon;

Environmental DNA reflects spatial distribution of a rare turtle in a lentic wetland assisted colonisation site

Abstract

Conservation translocations require robust post-release monitoring to evaluate their success, which can be challenging to implement and maintain. Monitoring techniques that can account for the dispersal and cryptic nature of translocated animals are necessary to provide critical information on persistence and distribution. In this study, we developed a highly sensitive environmental DNA (eDNA) assay specific to the Critically Endangered western swamp turtle (Pseudemydura umbrina), a species currently undergoing trials of assisted colonisation. Actively filtering sufficient volumes of water in lentic systems is difficult due to high concentrations of clogging particulates, therefore we assessed the viability of passive sampling in a controlled environment by submerging filter membranes and directly extracting DNA. Active sampling detected P. umbrina with a 97.6% detection rate, whereas passive sampling resulted in an 8.3% detection rate. We then used a fine-scale eDNA sampling design and radio tracked translocated P. umbrina at the assisted colonisation wetland to investigate eDNA dispersal and spatial monitoring resolution. We detected P. umbrina at 42% (7 / 17) of eDNA sample sites, and the probability of a positive eDNA detection was negatively associated with the distance of P. umbrina from the sampling site, indicating limited eDNA dispersal from the source. Systems with low natural mixing and limited eDNA dispersal provide an opportunity for high resolution spatial and temporal monitoring via targeted eDNA approaches. This is beneficial for monitoring rare species in these systems, as such high-resolution results can provide insights on species presence, distribution, and microhabitat use.

# Environmental DNA reflects spatial distribution of a rare turtle in a lentic wetland assisted colonisation site ## Description of the data and file structure Data provided include three csv files that support the findings of the study: *DNAconc_act_pass.csv*, *EA_eDNA.csv*, *zoo_qPCR.csv* An excel spreadsheet (.xlsx workbook) is also provided containing a separate sheet for each of the three csv files with the column descriptions: *DATA_DESCRIPTION.xlsx* ## CSV names *DNAconc_act_pass.csv* contains data for the total dsDNA concentrations extracted from active and passive samples collected at Perth Zoo. *zoo_qPCR.csv* contains data for eDNA sampling results at Perth Zoo. Missing code: n/a *EA_eDNA.csv* contains data used for the binary logistic regression at the assisted colonisation site.

Data was collected via environmental DNA sampling.

Keywords

passive eDNA, freshwater turtle, biomonitoring, Conservation translocation, eDNA, eDNA dispersal, FOS: Natural sciences

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average