Landmark DataTPS file containing landmark dataChapter 1_Disparity Data.TPSPhylogenetic TreeA nexus file containing the phylogenetic tree used in the phylogenetic comparative methods.Chapter 1_trees_final.nexusPrincipal Component scoresPrincipal Component scores used to construct the morphospace and also used in the mvMORPH analysis.Chapter 1_data_all PCs.csvPhylogeneticEM dataData used for PhylogeneticEM analysisChapter 1_PhylogeneticEM_data.csvConevol scriptScript used to run Conevol analysis in RChapter 1_Conevol.txtMVmorph scriptScript used to perform MVmorph analysis in RChapter 1_MVmorph.txtMVmorph_uncertainty scriptScript used to perform MVmorph analysis while accounting for uncertainty in the trophic ecologyChapter 1_MVmorph_uncertainty code.txtPhylogeneticEM scriptScript used to perform PhylogeneticEM analysis in RChapter 1_PhylogeneticEM.RSurface scriptScript used to perform SURFACE analysis in RChapter 1_Phylomorpospace and Surface.txtCo-occurrence scriptCalculate the probability of at least c of m shifts in morphological regime falling on the same branches of a phylogeny as e shifts in ecologyCo-occurrence.R

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