MicrobiomeR: An R Package for Simplified and Standardized Microbiome Analysis Workflows

descriptionPublicationkeyboard_double_arrow_right Article 31 Mar 2019Publisher:The Open JournalJournal:Journal of Open Source Software, volume 4, page 1,299 (eissn: 2475-9066,

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Authors: Robert A Gilmore; Shaurita Hutchins; Xiao Zhang; Eric Vallender;

doi: 10.21105/joss.01299

MicrobiomeR: An R Package for Simplified and Standardized Microbiome Analysis Workflows

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Abstract

MicrobiomeR is an R package for microbiome analysis that incorporates phyloseq, metacoder, taxa, and microbiome in order to standardize and simplify common microbiome workflows.

Related Organizations

University of Mississippi Medical Center
United States

Keywords

taxonomy, software, R, microbiome

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