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Biochemistry
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Biochemistry
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Biochemistry
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Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase

Authors: Boverio, Alessandro; Widodo, Wahyu S.; Santema, Lars L.; Rozeboom, Henriëtte J.; Xiang, Ruite; Guallar, Víctor; Mattevi, Andrea; +1 Authors

Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase

Abstract

ABSTRACT: Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their highselectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recentlydiscovered carbohydrate oxidase from the bacterium Ralstonia solanacearum, which is a member of the vanillyl alcohol oxidaseflavoprotein family. Due to its exceptionally high activity toward N-acetyl-D-galactosamine and N-acetyl-D-glucosamine, the enzymewas named N-acetyl-glucosamine oxidase (NagOx). In contrast to most known (fungal) carbohydrate oxidases, NagOx could beoverexpressed in a bacterial host, which facilitated detailed biochemical and enzyme engineering studies. Steady state kinetic analysesrevealed that non-acetylated hexoses were also accepted as substrates albeit with lower efficiency. Upon determination of the crystalstructure, structural insights into NagOx were obtained. A large cavity containing a bicovalently bound FAD, tethered via histidyl andcysteinyl linkages, was observed. Substrate docking highlighted how a single residue (Leu251) plays a key role in the accommodationof N-acetylated sugars in the active site. Upon replacement of Leu251 (L251R mutant), an enzyme variant was generated with adrastically modified substrate acceptance profile, tuned toward non-N-acetylated monosaccharides and disaccharides. Furthermore,the activity toward bulkier substrates such as the trisaccharide maltotriose was introduced by this mutation. Due to its advantage ofbeing overexpressed in a bacterial host, NagOx can be considered a promising alternative engineerable biocatalyst for selectiveoxidation of monosaccharides and oligosaccharides.

Countries
Italy, Spain, Netherlands, Spain
Keywords

:Informàtica::Aplicacions de la informàtica::Bioinformàtica [Àrees temàtiques de la UPC], 570, Flavoproteins, Crystal structure, Monosaccharides, Carbohydrates, Peptides and proteins, 540, Disaccharides, Àrees temàtiques de la UPC::Informàtica::Aplicacions de la informàtica::Bioinformàtica, Flavins, Simulació per ordinador, Catalytic Domain, Flavin-Adenine Dinucleotide, Protein engineering, Redox reactions, Oxidoreductases, Oxidation-Reduction

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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