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Eukaryotic Cell
Article . 2003 . Peer-reviewed
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Eukaryotic Cell
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Eukaryotic Cell
Article . 2004
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Genome-Wide Expression Analyses of Gene Regulation during Early Development of Dictyostelium discoideum

Authors: Negin, Iranfar; Danny, Fuller; William F, Loomis;

Genome-Wide Expression Analyses of Gene Regulation during Early Development of Dictyostelium discoideum

Abstract

ABSTRACT Using genome-wide microarrays, we recognized 172 genes that are highly expressed at one stage or another during multicellular development of Dictyostelium discoideum . When developed in shaken suspension, 125 of these genes were expressed if the cells were treated with cyclic AMP (cAMP) pulses at 6-min intervals between 2 and 6 h of development followed by high levels of exogenous cAMP. In the absence of cAMP treatment, only three genes, carA , gbaB , and pdsA , were consistently expressed. Surprisingly, 14 other genes were induced by cAMP treatment of mutant cells lacking the activatable adenylyl cyclase, ACA. However, these genes were not cAMP induced if both of the developmental adenylyl cyclases, ACA and ACR, were disrupted, showing that they depend on an internal source of cAMP. Constitutive activity of the cAMP-dependent protein kinase PKA was found to bypass the requirement of these genes for adenylyl cyclase and cAMP pulses, demonstrating the critical role of PKA in transducing the cAMP signal to early gene expression. In the absence of constitutive PKA activity, expression of later genes was strictly dependent on ACA in pulsed cells.

Keywords

Genome, Gene Expression Regulation, Developmental, Cell Differentiation, Cyclic AMP-Dependent Protein Kinases, Mutation, Cyclic AMP, Animals, Dictyostelium, Cells, Cultured, Adenylyl Cyclases, Oligonucleotide Array Sequence Analysis, Signal Transduction

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    87
    popularity
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    Top 10%
    influence
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
87
Top 10%
Top 10%
Top 10%
gold