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Mechanisms for ATP‐dependent chromatin remodelling: the means to the end

Authors: Flaus, Andrew; Owen-Hughes, Tom;

Mechanisms for ATP‐dependent chromatin remodelling: the means to the end

Abstract

Chromatin remodelling is the ATP‐dependent change in nucleosome organisation driven by Snf2 family ATPases. The biochemistry of this process depends on the behaviours of ATP‐dependent motor proteins and their dynamic nucleosome substrates, which brings significant technical and conceptual challenges. Steady progress has been made in characterising the polypeptides of which these enzymes are comprised. Divergence in the sequences of different subfamilies of Snf2‐related proteins suggests that the motors are adapted for different functions. Recently, structural insights have suggested that the Snf2 ATPase acts as a context‐sensitive DNA translocase. This may have arisen as a means to enable efficient access to DNA in the high density of the eukaryotic nucleus. How the enzymes engage nucleosomes and how the network of noncovalent interactions within the nucleosome respond to the force applied remains unclear, and it remains prudent to recognise the potential for both DNA distortions and dynamics within the underlying histone octamer structure.

Keywords

Models, Molecular, nucleotide excision-repair, Protein Conformation, in-vivo, SACCHAROMYCES-CEREVISIAE, Iswi, RNA-POLYMERASE, Adenosine Triphosphate, swi/snf, IN-VIVO, rna-polymerase, Adenosine Triphosphatases, isw2-nucleosome complex, histone modifications, NUCLEOSOME MOBILIZATION, yeast swi/snf complex, Snf2, Chromatin, Nucleosomes, SWI/SNF, snf2, saccharomyces-cerevisiae, 570, Saccharomyces cerevisiae Proteins, Macromolecular Substances, functional-analysis, iswi, histone, snf2 family, atp dependent chromatin remodelling, YEAST SWI/SNF COMPLEX, Allosteric Regulation, SNF2 FAMILY, Animals, Humans, ISW2-NUCLEOSOME COMPLEX, FUNCTIONAL-ANALYSIS, ATP dependent chromatin remodelling, nucleosome, Chd1, DNA, Chromatin Assembly and Disassembly, nucleosome mobilization, NUCLEOTIDE EXCISION-REPAIR, chd1, HISTONE MODIFICATIONS, Transcription Factors

  • BIP!
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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    107
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 1%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
107
Top 10%
Top 10%
Top 1%
bronze