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Developmental Dynamics
Article . 2014 . Peer-reviewed
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microRNA‐dependent temporal gene expression in the ureteric bud epithelium during mammalian kidney development

Authors: Volkhard Lindner; Andy Wessels; Jing Yu; Vidya K. Nagalakshmi;

microRNA‐dependent temporal gene expression in the ureteric bud epithelium during mammalian kidney development

Abstract

Background: Our previous study on mouse mutants with the ureteric bud (UB) epithelium‐specific Dicer deletion (Dicer UB mutants) demonstrated the significance of UB epithelium‐derived miRNAs in UB development. Results: Our whole‐genome transcriptional profiling showed that the Dicer mutant UB epithelium abnormally retained transcriptional features of the early UB epithelium and failed to express many genes associated with collecting duct differentiation. Furthermore, we identified a temporal expression pattern of early UB genes during UB epithelium development in which gene expression was detected at early developmental stages and became undetectable by embryonic day 14.5. In contrast, expression of early UB genes persisted at later stages in the Dicer mutant UB epithelium and increased at early stages. Our bioinformatic analysis of the abnormally persistently expressed early genes in the Dicer mutant UB epithelium showed significant enrichment of the let‐7 family miRNA targets. We further identified a temporal expression pattern of let‐7 miRNAs in the UB epithelium that is anti‐parallel to that of some early UB genes during kidney development. Conclusions: We propose a model in which the let‐7 family miRNAs silence the expression of a subset of early genes in the UB epithelium at later developmental stages to promote collecting duct differentiation. Developmental Dynamics 244:444–456, 2015. © 2014 Wiley Periodicals, Inc.

Keywords

Mice, Knockout, Mice, MicroRNAs, Animals, Gene Expression Regulation, Developmental, Cell Differentiation, Kidney Tubules, Collecting, Urothelium, Transcriptome

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
9
Average
Average
Average
bronze